Mailund on the Internet

On Writing, Science, Programming and more

Publications

Textbooks

2019

2018

2017

Peer-reviewed publications

2018

  • A comprehensive genomic history of extinct and living elephants
    E Palkopoulou, M Lipson, S Mallick, S Nielsen, N Rohland, S Baleka, E Karpinski, AM Ivancevic, T-H To, RD Kortschak, JM Raison, Z Qu, T-J Chin, KW Alt, S Claesson, L Dalén, RDE MacPhee, H Meller, AL Roca, OA Ryder, D Heiman, S Young, M Breen, C Williams, BL Aken, M Ruffier, E Karlsson, J Johnson, F Di Palma, J Alfoldi, DL Adelson, T Mailund, K Munch, K Lindblad-Toh, M Hofreiter, H Poinar and D Reich
    PNAS (2018). doi.org/10.1073/pnas.1720554115

2017

2016

  • Measurement Units in R
    Edzer Pebesma, Thomas Mailund, James Hiebert
    The R Journal, 8 (2), 486-494 (2016)

  • Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx
    F Abascal, A Corvelo, F Cruz, JL Villanueva-Cañas, A Vlasova, M Marcet-Houben, B Martínez-Cruz, JY Cheng, P Prieto, V Quesada, J Quilez, G Li, F García, M Rubio-Camarillo, L Frias, P Ribeca, S Capella-Gutiérrez, JM Rodríguez, F Câmara, E Lowy, L Cozzuto, IE, ML Tress, JL Rodriguez-Ales, J Ruiz-Orera, F Reverter, M Casas-Marce, L Soriano, JR Arango, S Derdak, B Galán, J Blanc, M Gut, B Lorente-Galdos, M Andrés-Nieto, C López-Otín, A Valencia, I Gut, JL García, R Guigó, WJ Murphy, A Ruiz-Herrera, T Marques-Bonet, G Roma, C Notredame, T Mailund, MM Albà, T Gabaldón, T Alioto and JA Godoy
    Genome Biology201617:251 DOI: 10.1186/s13059-016-1090-1

  • Selective sweeps across twenty millions years of primate evolution
    K Munch, K Nam, MH Schierup and T Mailund
    Mol Biol Evol (2016) doi: 10.1093/molbev/msw199

  • A genomic history of Aboriginal Australia
    A-S Malaspinas, MC Westaway, C Muller, VC Sousa, O Lao, I Alves, A Bergström, G Athanasiadis, JY Cheng, JE Crawford, TH Heupink, E Macholdt, S Peischl, S Rasmussen, S Schiffels, S Subramanian, JL Wright, A Albrechtsen, C Barbieri, I Dupanloup, A Eriksson, A Margaryan, I Moltke, I Pugach, TS Korneliussen, IP Levkivskyi, JV Moreno-Mayar, S Ni, F Racimo, M Sikora, Y Xue, FA Aghakhanian, N Brucato, S Brunak, PF Campos, W Clark, S Ellingvåg, G Fourmile, P Gerbault, D Injie, G Koki, M Leavesley, B Logan, A Lynch, EA Matisoo-Smith, PJ McAllister, AJ Mentzer, M Metspalu, AB Migliano, L Murgha, ME Phipps, W Pomat, D Reynolds, F-X Ricaut, P Siba, MG Thomas, T Wales, CM Wall, SJ Oppenheimer, C Tyler-Smith, R Durbin, J Dortch, A Manica, MH Schierup, RA Foley, MM Lahr, C Bowern, JD Wall, T Mailund, M Stoneking, R Nielsen, MS Sandhu, L Excoffier, DM Lambert and E Willerslev
    Nature 2016. doi:10.1038/nature18299

  • Spitting for Science: Danish High School Students Commit to a Large-Scale Self-Reported Genetic Study
    G Athanasiadis, FG Jørgensen, JY Cheng, PC Kjærgaard, MH Schierup, and T Mailund
    PLoS ONE 11(8): e0161822. doi:10.1371/journal.pone.0161822

  • Nationwide Genomic Study in Denmark Reveals Remarkable Population Homogeneity
    G Athanasiadis, JY Cheng, BJ Vilhjálmsson, FG Jørgensen, TD Als, SL Hellard, T Espeseth, PF Sullivan, CM Hultman, PC Kjærgaard, MH Schierup, and T Mailund
    Genetics, DOI: 10.1534/genetics.116.189241 (2016)

  • The ecological niche and distribution of Neanderthals during the Last Interglacial
    BM Benito, J-C Svenning, T Kellberg-Nielsen, F Riede, G Gil-Romera, T Mailund, PC Kjaergaard, and BS Sandel
    Journal of Biogeography, DOI: 10.1111/jbi.12845 (2016)

2015

2014

2013

2012

2011

2010

2009

2008

2007

2006

2005

2004

2003

2002

2001

  • Condensed State Spaces for Timed Petri Nets
    S. Christensen, L.M. Kristensen and T. Mailund
    Proceedings of International Conference on Application and Theory of Petri Nets (ICATPN), LNCS 2075 101–120 Springer-Verlag (2001)

  • A Sweep-Line Method for State Space Exploration
    S. Christensen, L.M. Kristensen and T. Mailund
    Proceedings of Tools and Algorithms for the Construction and Analysis of Systems (TACAS), LNCS 2031 450–464 Springer-Verlag (2001)

  • State Space Methods for Timed Coloured Petri Nets
    S. Christensen, K. Jensen, T. Mailund and L.M. Kristensen
    Proceedings of 2nd International Colloquium on Petri Net Technologies for Modelling Communication Based Systems. pp. 14-15, Berlin Germany (2001)

2000

  • Separation of Style and Content with XML in an Interchange Format for High-level Petri Nets
    T. Mailund and K.H. Mortensen
    Proceedings of the Meeting on XML/SGML based Interchange Formats for Petri Nets, pp. 7-12, Aarhus, Denmark (2000)

1999

  • Parameterised Coloured Petri Nets
    T. Mailund
    Proceedings of Second Workshop on Practical Use of Coloured Petri Nets and Design/CPN, DAIMI PB-541 pp. 133-151, Aarhus, Denmark (1999)

1998

  • Textual Interchange Format for High-Level Petri Nets
    R.B. Lyngsø and T. Mailund
    Proceedings of First Workshop on Practical Use of Coloured Petri Nets and Design/CPN, DAIMI PB-532 pp. 47-64 Aarhus, Denmark (1998)

Other publications